feat: Complete sync of all Claude Code CLI upgrades

- Add all 21 commands (clawd, ralph, prometheus*, dexto*)
- Add all hooks (intelligent-router, clawd-*, prometheus-wrapper, unified-integration-v2)
- Add skills (ralph, prometheus master)
- Add MCP servers (registry.json, manager.sh)
- Add plugins directory with marketplaces
- Add health-check.sh and aliases.sh scripts
- Complete repository synchronization with local ~/.claude/

Total changes: 100+ new files added
All integrations now fully backed up in repository

🤖 Generated with Claude Code
Co-Authored-By: Claude <noreply@anthropic.com>

hooks/prometheus-wrapper.sh

@@ -0,0 +1,88 @@
+#!/bin/bash
+# Prometheus Wrapper - All modes and agents
+
+set -euo pipefail
+
+PROMETHEUS_DIR="${HOME}/.claude/prometheus"
+VENV_DIR="${PROMETHEUS_DIR}/venv"
+LOG_DIR="${PROMETHEUS_DIR}/logs"
+
+mkdir -p "$LOG_DIR"
+
+log_prometheus() {
+    echo "[$(date -u +"%Y-%m-%d %H:%M:%S UTC")] [prometheus] $*" | tee -a "${LOG_DIR}/wrapper.log"
+}
+
+check_installed() {
+    if [[ ! -d "$VENV_DIR" ]]; then
+        echo "Prometheus not installed. Run: bash ${PROMETHEUS_DIR}/install.sh"
+        return 1
+    fi
+    return 0
+}
+
+execute_prometheus() {
+    local task="$1"
+    local mode="${2:-auto}"
+    local repo="${3:-.}"
+    
+    log_prometheus "Mode: $mode, Repo: $repo"
+    log_prometheus "Task: $task"
+    
+    if ! check_installed; then
+        echo "ERROR: Prometheus not installed. Run install script first." >&2
+        return 1
+    fi
+    
+    source "${VENV_DIR}/bin/activate"
+    cd "$repo"
+    
+    # Simulate Prometheus execution (would call actual Python code)
+    case "$mode" in
+        classify|bug|feature|context|edit|test)
+            log_prometheus "Running in $mode mode"
+            echo "Prometheus [$mode mode]: Analyzing task..."
+            echo "Task: $task"
+            echo ""
+            echo "Note: Full Prometheus execution requires:"
+            echo "  1. Run: bash ~/.claude/prometheus/install.sh"
+            echo "  2. Configure: API keys and Neo4j (optional)"
+            echo "  3. Dependencies: LangGraph, Docker, Neo4j"
+            ;;
+        *)
+            log_prometheus "Running in auto mode"
+            echo "Prometheus [auto]: Detecting task type..."
+            echo "Task: $task"
+            ;;
+    esac
+}
+
+main() {
+    local task=""
+    local mode="auto"
+    local repo="."
+    
+    while [[ $# -gt 0 ]]; do
+        case "$1" in
+            --classify|--bug|--feature|--context|--edit|--test)
+                mode="${1#--}"
+                shift
+                ;;
+            --repo|-r)
+                repo="$2"
+                shift 2
+                ;;
+            *)
+                task="$1"
+                shift
+                ;;
+        esac
+    done
+    
+    [[ -z "$task" ]] && task=$(cat)
+    [[ -z "$task" ]] && echo "Usage: $0 [--classify|--bug|--feature|--context|--edit|--test] [--repo <path>] <task>" && exit 1
+    
+    execute_prometheus "$task" "$mode" "$repo"
+}
+
+main "$@"