--- name: drugbank-search description: Search DrugBank comprehensive drug database with natural language queries. Drug mechanisms, interactions, and safety data powered by Valyu. keywords: - drugbank - drugs - pharmacology - drug-interactions - adverse-reactions - semantic-search license: MIT --- # DrugBank Search Search the complete DrugBank database of drug information including mechanisms of action, interactions, targets, and pharmacology using natural language queries powered by Valyu's semantic search API. ## Why This Skill is Powerful - **No API Parameter Parsing**: Just pass natural language queries directly - no need to construct complex search parameters - **Semantic Search**: Understands the meaning of your query, not just keyword matching - **Full-Text Access**: Returns complete drug information including mechanisms, interactions, and targets - **Image Links**: Includes molecular structures and data visualizations - **Comprehensive Coverage**: Access to all DrugBank drug data ## Requirements 1. Node.js 18+ (uses built-in fetch) 2. Valyu API key from https://platform.valyu.ai ($10 free credits) ## CRITICAL: Script Path Resolution The `scripts/search` commands in this documentation are relative to this skill's installation directory. Before running any command, locate the script using: ```bash DRUGBANK_SCRIPT=$(find ~/.claude/plugins/cache -name "search" -path "*/drugbank-search/*/scripts/*" -type f 2>/dev/null | head -1) ``` Then use the full path for all commands: ```bash $DRUGBANK_SCRIPT "ACE inhibitors" 15 ``` ## API Key Setup Flow When you run a search and receive `"setup_required": true`, follow this flow: 1. **Ask the user for their API key:** "To search DrugBank, I need your Valyu API key. Get one free ($10 credits) at https://platform.valyu.ai" 2. **Once the user provides the key, run:** ```bash scripts/search setup ``` 3. **Retry the original search.** ## When to Use This Skill - Comprehensive drug information lookup - Drug interactions and side effects research - Target identification and validation - Mechanism of action studies - Pharmacokinetics and pharmacodynamics research - Drug metabolism and adverse event data ## Output Format ```json { "success": true, "type": "drugbank_search", "query": "ACE inhibitors", "result_count": 10, "results": [ { "title": "Drug Name", "url": "https://drugbank.com/...", "content": "Drug information, mechanism, interactions...", "source": "drugbank", "relevance_score": 0.95, "images": ["https://example.com/structure.png"] } ], "cost": 0.025 } ``` ## Processing Results ### With jq ```bash # Get drug names scripts/search "query" 10 | jq -r '.results[].title' # Get URLs scripts/search "query" 10 | jq -r '.results[].url' # Extract full content scripts/search "query" 10 | jq -r '.results[].content' ``` ## Common Use Cases ### Drug Information ```bash # Find drug details scripts/search "metformin pharmacokinetics" 50 ``` ### Drug Interactions ```bash # Search for interactions scripts/search "CYP3A4 inhibitor drug interactions" 20 ``` ### Mechanism Research ```bash # Find mechanism data scripts/search "selective serotonin reuptake inhibitors mechanism" 15 ``` ### Target Identification ```bash # Search for drug targets scripts/search "drugs targeting BCR-ABL fusion protein" 25 ``` ## Error Handling All commands return JSON with `success` field: ```json { "success": false, "error": "Error message" } ``` Exit codes: - `0` - Success - `1` - Error (check JSON for details) ## API Endpoint - Base URL: `https://api.valyu.ai/v1` - Endpoint: `/search` - Authentication: X-API-Key header ## Architecture ``` scripts/ ├── search # Bash wrapper └── search.mjs # Node.js CLI ``` Direct API calls using Node.js built-in `fetch()`, zero external dependencies. ## Adding to Your Project If you're building an AI project and want to integrate DrugBank Search directly into your application, use the Valyu SDK: ### Python Integration ```python from valyu import Valyu client = Valyu(api_key="your-api-key") response = client.search( query="your search query here", included_sources=["valyu/valyu-drugbank"], max_results=20 ) for result in response["results"]: print(f"Title: {result['title']}") print(f"URL: {result['url']}") print(f"Content: {result['content'][:500]}...") ``` ### TypeScript Integration ```typescript import { Valyu } from "valyu-js"; const client = new Valyu("your-api-key"); const response = await client.search({ query: "your search query here", includedSources: ["valyu/valyu-drugbank"], maxResults: 20 }); response.results.forEach((result) => { console.log(`Title: ${result.title}`); console.log(`URL: ${result.url}`); console.log(`Content: ${result.content.substring(0, 500)}...`); }); ``` See the [Valyu docs](https://docs.valyu.ai) for full integration examples and SDK reference.